BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027E09LP1|AL428742
(904 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1604 1693 0.0
>3x_Contig1604
Length = 15703
Score = 1693 bits (851), Expect = 0.0
Identities = 890/905 (98%), Gaps = 1/905 (0%)
Strand = Plus / Plus
Query: 1 tattttcaacaatctccgatgaaggaaaacaacctaaataacttgagtatccaacaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4867 tattttcaacaatctccgatgaaggaaaacaacctaaataacttgagtatccaacaaagt 4926
Query: 61 gatcaagcccgtacttttgatactacaatgcctatttctgatgttccaaataatggcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4927 gatcaagcccgtacttttgatactacaatgcctatttctgatgttccaaataatggcaac 4986
Query: 121 gtcgtgaatgacgaatacctgattgacatttccccacccagaaataacgtaccctattct 180
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 4987 gtcgtgaatgacgaatacctgattgacatttccccacccataaataacttaccctattct 5046
Query: 181 acaccagccgcaattacagccaatatgcaagatcaaatcatttcatcgcaacctttat-c 239
|||||| || |||||||| ||||||| ||| ||||||||||||||| |||||||||| |
Sbjct: 5047 acaccatcctcaattacatccaatattcaatttcaaatcatttcatctcaacctttatgc 5106
Query: 240 tcaatctcaatctcaatctaaacctcagcctcttcctccrscccarccccaaccccaacc 299
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 5107 tcaatctcaatctcaatctaaacctcagcctcttcctccaccccaaccccaaccccaacc 5166
Query: 300 ccaaccccaagctcaagctcaaccgaatacacgagcttcactgaggcctgagcgccagca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5167 ccaaccccaagctcaagctcaaccgaatacacgagcttcactgaggcctgagcgccagca 5226
Query: 360 gcaaattcctgctcaaccacgattagaccttacttttgatcaacttgatctttcaaagaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5227 gcaaattcctgctcaaccacgattagaccttacttttgatcaacttgatctttcaaagaa 5286
Query: 420 ttcattgactaggcagtcagatacagaactagaagaaagcattatatcagatgaaagcat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5287 ttcattgactaggcagtcagatacagaactagaagaaagcattatatcagatgaaagcat 5346
Query: 480 ttcactcgatttgaagcagccgaaattgaaggagcctgtaacccaacctcgtcaaacaac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5347 ttcactcgatttgaagcagccgaaattgaaggagcctgtaacccaacctcgtcaaacaac 5406
Query: 540 atctccagggtctgagagtaaagaatttctgaaacccgccaaagttcctaagcgtcggtc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5407 atctccagggtctgagagtaaagaatttctgaaacccgccaaagttcctaagcgtcggtc 5466
Query: 600 attagacctaaaatatcaagaaatcaatctttcgaatgatgatcaacgtaagcrtcgaaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5467 attagacctaaaatatcaagaaatcaatctttcgaatgatgatcaacgtaagcatcgaaa 5526
Query: 660 aaataagacatcattttcccgcaccagtgtcagaagatctgtagaaatggaacgcatgar 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5527 aaataagacatcattttcccgcaccagtgtcagaagatctgtagaaatggaacgcatgaa 5586
Query: 720 acatgactccaactctacatctaattctaatgcaagagacgaaaccaaggagacgaaaag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5587 acatgactccaactctacatctaattctaatgcaagagacgaaaccaaggagacgaaaag 5646
Query: 780 aagatcgttctttggtgtattcaaatgataggtaaccaagggtaaaagaaattagttcat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5647 aagatcgttctttggtgtattcaaatgataggtaaccaagggtaaaagaaattagttcat 5706
Query: 840 ccgatagcataccaaaaaaaacaacctgaactgattgaagcaccgatgtccttattcttt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5707 ccgatagcataccaaaaaaaacaacctgaactgattgaagcaccgatgtccttattcttt 5766
Query: 900 taatt 904
|||||
Sbjct: 5767 taatt 5771
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7118
Number of Sequences: 1807
Number of extensions: 7118
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)